Epi Multiome
20K nuclei/sample or 160K nuclei/chip
Run 8 samples in parallel
Why choose Epi Multiome
Multiomic same-cell open chromatin and gene expression profiling
Reveal regulatory mechanisms behind disease, developmental plasticity, and cell identity
Assay specifications
Mouse
Human
Rat
Non-human primate
Marine
Plant
Insect
Species
Cell suspension
Nuclei suspension
Fresh tissue
Frozen tissue
Organoids
Compatible samples
Chromatin accessibility
3' gene expression
Multiomics
Compatible instruments
20K nuclei/sample
160K nuclei/chip
8 samples/chip
Singleplex throughput options
Shop reagents, kits & more
Epi Multiome ATAC
Each multiome experiment requires a chip, index kit, and core reagents. If you're unsure what you need, use the experiment builder to find the custom list of items required for your experiment.
Documents and resources
Product sheet
User guides
Technical notes
Application notes
Sequencing requirements
Minimum 20,000 read pairs/nucleus for gene expression; 25,000 read pairs per nucleus for ATAC
Analysis guides
Videos
Data analysis
Cell Ranger ARC
Cell Ranger is a set of free analysis pipelines for processing Chromium Single Cell Multiome ATAC + Gene Expression data.
Loupe Browser
Desktop application for Windows and MacOS that allows you to interactively visualize data.
Cloud Analysis
Cloud Analysis enables quick and easy access to Cell Ranger pipelines from your web browser.
Featured publications
Publications
Nature, 2024 Makoto Yamagishi, et al.
Cancer Cell, 2024 Xin Huang, et al.
Nature, 2021 Kathryn C Allaway, et al.
Nature, 2022 Jonas Simon Fleck, et al.
Cell Stem Cell, 2022 Haofei Wang, et al.
Featured datasets
Datasets
Related products
Universal 3'
Whole transcriptome gene expression profiling with broad species compatibility.
Universal 5'
5' gene expression alongside V(D)J repertoire profiling and antigen specificity of T and B cells.
Flex Apex
Probe-based whole transcriptome profiling for fresh, frozen, or fixed samples (even FFPE), plus 96-well multiplexing for highest throughput.