Unparalleled single cell spatial discovery
The ultimate single cell spatial biology experience
Gene and protein panels
Customizable ready-to-use panels or fully custom gene panels with add-on protein subpanels
Xenium Analyzer instrument
Industry-leading speed and throughput for single cell spatial imaging
Data analysis
Powerful on-board analysis and Xenium Explorer visualization software
Same-cell spatial multiomics with Xenium Protein
A first-of-its-kind fully optimized & automated solution for integrated high-plex spatial RNA and protein expression
Validated, ready-to-use immuno-oncology-focused protein and gene panels eliminate the need for optimization
Single-instrument workflow enables integrated analysis in Xenium Explorer, no data registration required
Built for rapid data exploration
Immediate data access
Access your data as soon as the Xenium run is complete.
Easy-to-use interface
Intuitively visualize morphology, protein markers, segmentation, cell typing, and transcript density—no bioinformatics experience required.
Explore at any scale
Seamlessly explore your data at any scale, from whole tissue sections to single transcripts.
Diverse panel menu to fit any research need
<500-gene panels
Focused tissue and pathway characterization
Full custom panel option
Multiomic analysis with Xenium Protein subpanels
Explore product
5,000-gene panels
Broad discovery in human and mouse
Customizable with up to 100 additional genes
Explore across tissues, disease areas, and drug targets
Products
A state-of-the-art single cell spatial imaging instrument
Seamlessly integrates transcript detection workflow, high-resolution imaging, decoding, and onboard data analysis for fresh frozen or FFPE tissues
Simple run setup and cleanup operations, an intuitive touchscreen, and ergonomic design make instrument operation a breeze
Go from tissue section to data for up to 5,000 genes in ≤6 days or get even faster analysis times with smaller gene panels
Xenium Catalyst Program
Discover the power of Xenium technology with our in-house pilot run service
Our Catalyst program lets you test drive the Xenium platform, evaluate its capabilities, and explore your spatial transcriptomics data alongside a team of scientific experts.
4 weeks
End-to-end service completed in as few as
10+ panels
Complete access to fully custom or
Resources
See Xenium Protein data in action
Get a hands-on look at what same-section protein and high-plex spatial RNA can show you in this interactive Xenium web demo.
Get to know the Xenium platform
Explore the unique platform features, from padlock chemistry to panels, that power the ultimate single cell spatial biology experience.
Grant writing assistance
Get the information you need to write grants featuring Xenium experiments (including technology overview, benchmarking data, and more).
Unlock the full spectrum of biology
| Platform | |||
| When to use | Comprehensive single cell dataIdeal for deep characterization of cell populations and states. | High-resolution discoveryUnderstand complex tissues, neighborhoods, and cell to cell interactions.
Integration with other spatial-omics, histology, and morphology. | |
| Why use | Unbiased single cell discovery
High per-gene sensitivity | Single cell spatial discovery
High per-gene sensitivity | Expanded spatial discovery |
| Applications | Whole transcriptome gene expression
Protein
TCR, BCR
CRISPR
ATAC | Targeted gene expression (up to 5,000 genes)
Multiomic gene and protein expression (up to 480 genes and 27 proteins) | Whole transcriptome gene expression |
| Resolution | Single cell | Subcellular | Single cell–scale |
| Data readout | NGS-based | Imaging-based | NGS-based |
| Sample compatibility | Single cell or nuclei suspensions from fresh, frozen, or FFPE samples | Fresh frozen
FFPE | FFPE
Fresh frozen
Fixed frozen |
See what Xenium users are saying