Fresh Cortex, Hippocampus, and Ventricular Zone from Embryonic Mouse Brain (E18)
Epi ATAC dataset analyzed using Cell Ranger ATAC 1.1.0
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Dataset overview
Output and supplemental files
Input files
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Fresh cortex, hippocampus, and ventricular zone from embryonic mouse brain (E18). ~7,700 transposed nuclei were loaded and 4,008 nuclei were recovered.
Samples were sequenced on Illumina NovaSeq with approximately 45k read pairs per cell:
- 50 bp Read 1
- 8 bp i7 index (sample index)
- 16 bp i5 index (10x Barcode)
- 49 bp Read 2
This dataset is licensed under the Creative Commons Attribution license.