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1k Brain Nuclei from an E18 Mouse

Universal 3' Gene Expression dataset analyzed using Cell Ranger 2.0.1

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Nuclei from a combined cortex, hippocampus and sub ventricular zone of an E18 mouse.

  • 954 nuclei detected
  • Sequenced on Illumina HiSeq2500 with approximately 51,000 reads per cell
  • 26bp read1 (16bp Chromium barcode and 10bp UMI), 98bp read2 (transcript), and 8bp I7 sample barcode
  • Analysis run with —cells=2000

This dataset is licensed under the Creative Commons Attribution license.