The web summary file (web_summary. html) output by the cellranger multi pipeline is the initial point of reference for determining sample performance in the Chromium Fixed RNA Profiling (Single Cell Gene Expression Flex) assay. This Technical Note presents an overview of web summary file interpretation, including the expected metrics and characteristic plots for Gene Expression libraries generated using this Fixed RNA Profiling (FRP) assay. Metrics associated with product extensions (i.e., Feature Barcode technology) are not included in this document.
Interpreting Cell Ranger multi Web Summary Files for Fixed RNA Profiling
Technical Note, CG000729
CG000729_TechNote_WebSummary_Chromium_FixedRNAProfiling_RevA.pdf
- Document Type
- Technical Note
- Last Modified
- January 31, 2024