RT-based assays using GEM-X techology to analyze immune diversity
Up to 80% cell recovery
>40% higher gene sensitivity vs other methods
More usable reads, save up to 50% on sequencing costs
Each experiment requires a chip, index kit, and core reagents plus an optional feature barcoding kit. If you're unsure what you need, use the experiment builder find the custom list of items required for your experiment.
Consumables
Choose a version
Nuclei Isolation (optional)
1000494
Chromium Nuclei Isolation with RNase Inhibitor Kit, 16rxns
Chip
1000698
Chromium GEM-X Single Cell 5' Chip Kit v3, 4 chips
Index Kit
1000215
Dual Index Kit TT Set A 96 rxns
1000250
Dual Index Kit TN Set A, 96 rxn
Core Reagents
1000695
Chromium GEM-X Single Cell 5' Kit v3, 4 rxns
1000699
Chromium GEM-X Single Cell 5' Kit v3, 16 rxns
V(D)J Amplification Kit (optional)
1000252
Chromium Single Cell Human TCR Amplification Kit, 16 rxns
1000253
Chromium Single Cell Human BCR Amplification Kit, 16 rxns
1000254
Chromium Single Cell Mouse TCR Amplification Kit, 16 rxns
1000255
Chromium Single Cell Mouse BCR Amplification Kit, 16 rxns
1000694
Library Construction Kit C, 16 rxns
CRISPR Kit (optional)
1000451
5' CRISPR Kit, 16 rxns
Feature Barcoding Kit (optional)
1000703
Chromium GEM-X Single Cell 5 Feature Barcode Kit v3, 16 rxns
Design the experiment that's right for you
Minimum 20,000 read pairs/cell for gene expression; 5,000 read pairs/cell for V(D)J, protein, CRISPR analysis.
View allCell Ranger is a set of free analysis pipelines for processing Chromium Single Cell data
Learn moreLoupe Browser is a desktop application for Windows and MacOS that allows you to interactively visualize data
Learn moreCloud Analysis enables quick and easy access to Cell Ranger pipelines from your web browser
Learn moreNature Medicine, 2023
Jun Tian, et al.
Nature Cancer, 2023
Francesco Maura, et al.
Nature Medicine, 2023
Nathaniel Anderson, et al.
Probe-based assays using GEM-X technology to capture 18,000+ coding genes, customizable to fit project needs
RT-based assays using GEM-X techology to capture the whole transcriptome to gather broad information from diverse species
Single cell profiling of open chromatin and 3' gene expression from the same nucleus
Single cell profiling of open chromatin