Human B cells from a Healthy Donor, 1k cells

Universal 5' Gene Expression dataset analyzed using Cell Ranger 6.0.0

Assess data quality

View summary metrics to assess data quality and more.

Visualize and explore data

Discover differentially expressed genes, visualize your favorite genes, and explore your data with our visualization software.

Dataset overview

Output and supplemental files

Input files

Learn about Chromium analysis

Human CD19+ B cells of a healthy male donor aged 27 were obtained by 10x Genomics from AllCells.

Gene Expression and BCR Enriched libraries were generated from 1,650 cells (89% viable, expected cell recovery 915) as described in the Chromium Next GEM Single Cell 5' Reagent Kits v2 (Dual Index) User Guide (CG000331 Rev A) and sequenced on an Illumina NovaSeq 6000.

These libraries were analyzed using the new Cell Ranger multi pipeline, which combines Gene Expression, Feature Barcode, TCR enriched, and BCR enriched libraries from the same sample. Cell Ranger multi enables consistent cell calling between gene expression and VDJ libraries.

Sequencing Configuration

Paired-end (26X90), dual-indexed sequencing. Read 1: 26 cycles, i7 index: 10 cycles, i5 index: 10 cycles, Read 2: 90 cycles

This dataset is licensed under the Creative Commons Attribution license.