BJ with 10% MKN-45 Spike-In
Single Cell CNV dataset analyzed using Cell Ranger DNA 1.0.0
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Dataset overview
Output and supplemental files
Input files
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Overview: BJ Fibroblast Euploid Cell Line with a 10% spike-in of cells from MKN-45 Gastric Cancer Cell Line MKN-45 cells were mixed with BJ cell in a ratio of 1:10 (BJ cells were cultured at 10X, passaged 3 times and grown to confluence to synchronize cell into a G1 maintaining state)
- Num Cells: 462
- Total Sequencing Reads: 1.2 billion
- Median Effective Reads per Mb: 509
- Sequencer: Novaseq
- Read Construct: 100 (R1), 8 (i7), 100 (R2)
- Any special pipeline parameters: No
This dataset is licensed under the Creative Commons Attribution license.