10k Brain Cells from an E18 Mouse (v3 chemistry)
Universal 3' Gene Expression dataset analyzed using Cell Ranger 3.0.0
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Dataset overview
Output and supplemental files
Input files
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Cells from a combined cortex, hippocampus and sub ventricular zone of an E18 mouse (the same cells were used to generate neuron_1k_v2, neuron_1k_v3).
- 11,843 cells detected
- Sequenced on Illumina NovaSeq with approximately 30,000 reads per cell
- 28bp read1 (16bp Chromium barcode and 12bp UMI), 91bp read2 (transcript), and 8bp I7 sample barcode
- run with --expect-cells=10000
This dataset is licensed under the Creative Commons Attribution license.