Workflow Documentation
Find resources from protocols to free-to-use analysis tools.
Experimental Planning and Design
Plan ahead by referring to the list of equipment, kits, and reagents needed for the Visium Spatial Gene Expression for FFPE protocols.
Tissue Prep
For proper FFPE tissue sectioning and placement.
Tissue Staining
Deparaffinize, stain, image, and decrosslink tissue.
Imaging
For imaging hardware, general image acquisition and analysis guidelines, and example images.
Probe Sets
Find a list of probes targeting protein-coding genes in human or mouse transcriptome for the Visium for FFPE assay.
Library Construction
Construct a sequencing-ready Visium spatial library from your FFPE tissue sections.
Sequencing
Sequence your Visium spatial library as per our provided recommendations.
Software Analysis
Analyze your Visium spatial data using our pipelines and visualization tools.