Provides guidance on preparation of master mix and gel beads and loading of  a Chromium Next GEM training chip in the Chromium Controller and run the Controller.

Chromium Next GEM Training Kit User Guide

Chromium X Series

Chromium Epi ATAC (Assay for Transposase Accessible Chromatin) analyzes thousands of unique open chromatin fragments genome-wide with single cell resolution.

Plan ahead by referring to the list of equipment, kits, and reagents needed for Single Cell ATAC.

Experimental Design

Experimental Design & Planning

Prepare optimal single cell/nuclei suspension by following our Demonstrated Protocols.

Sample Prep

Refer to instrument-specific documents for seamless instrument operation.

Instruments

Construct a sequencing-ready single cell library by following our step-by-step User Guide / Protocol.

Library Construction

Sequence your single cell library as per our provided recommendations.

Sequencing

Analyze your single cell data using our pipelines, visualization, and Cloud Analysis tools.

Software Analysis

Epi ATAC

Overview

User Guides

Workflow Documentation

Datasets

Videos

Publications

What is Epi ATAC?

We provide resources from protocols, user guides, and free-to-use analysis tools.

Documentation

Access free, publicly available data from a number of different sample types generated with Chromium single cell solutions.

Explore how-to videos and training modules.

Chromium Next GEM Epi ATAC v2

Chromium Next GEM Epi ATAC v1.1

Chromium Next GEM Epi ATAC

Find answers to common technical questions, from sample prep through data analysis, about Chromium single cell workflows.

Read key peer-reviewed research publications offering greater insights into biology, enabled by 10x Genomics products and technologies.

Chromium Next GEM Training Kit User Guide

User Guide, CG000210

CG000210_ChromiumNextGEMTrainingKitUserGuide_RevG.pdf