Visium CytAssist for FFPE enables spatial transcriptomic analysis using standard histology workflows
Visualizing the spatial arrangement of cells and their gene expression with native morphological context in tissues is crucial to the comprehensive understanding of biology and disease. With CytAssist, we demonstrate spatial transcriptome-scale detection of gene expression in FFPE tissue samples sectioned on standard histology glass slides via the transfer of transcriptomic probes from tissues of varying thickness, RNA quality, size, and origin.
Visualizing the spatial arrangement of cells and their gene expression with native morphological context in tissues is crucial to the comprehensive understanding of biology and disease. With CytAssist, we demonstrate spatial transcriptome-scale detection of gene expression in FFPE tissue samples sectioned on standard histology glass slides via the transfer of transcriptomic probes from tissues of varying thickness, RNA quality, size, and origin.