2k Brain Nuclei from an Adult Mouse (>8 weeks)

Single Cell Gene Expression dataset analyzed using Cell Ranger 2.0.1

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Dataset overview

Output and supplemental files

Input files

Learn about Chromium analysis

Nuclei from a combined cortex, hippocampus and sub ventricular zone of an adult mouse (>8 weeks).

2,352 nuclei detected
Sequenced on Illumina HiSeq4000 with approximately 48,000 reads per cell
26bp read1 (16bp Chromium barcode and 10bp UMI), 98bp read2 (transcript), and 8bp I7 sample barcode
Analysis run with —cells=2000

This dataset is licensed under the Creative Commons Attribution license.