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Space Ranger 2.1
Release Notes
Space Ranger 2.1
Overview
Getting Started
Download Center
Analysis
Inputs
Overview
FASTQs
Generating FASTQs
Specifying FASTQs
Demultiplexing with Illumina software
Image
Image recommendation
Slide parameters
Slide layout download
Manual fiducial alignment
Manual CytAssist image alignment
Running Pipelines
Choosing a pipeline
Computing options
Space Ranger commands
Troubleshooting
Poly-A based assay
count (Spatial GEX)
Probe-based assay
count (Spatial GEX)
count (CytAssist GEX)
count (CytAssist GEX + PEX)
Feature Reference
Aggr
Aggr
Outputs
Overview
Web Summary
Secondary Analysis
Matrices
Spatial Outputs
Spot Deconvolution Outputs
BAM
Molecule Info (H5)
Count Outputs
Aggr Outputs
Tutorials
Algorithms
Advanced
Release Notes
Q&A
Datasets
Loupe Browser
Version
v2.1
Click here for older versions
Release Notes
Release Notes for Space Ranger
v1-v2.1