All datasets

INSECT: Caterpillar

De Novo Assembly dataset analyzed using Supernova 2.0.0

Assess data quality
View summary metrics to assess data quality and more.
View summary
Visualize and explore data
Discover differentially expressed genes, visualize your favorite genes, and explore your data with our visualization software.

Learn about Chromium analysis

Caterpillar collected in Pleasanton, CA, USA. Salting out protocol used for DNA extraction.

  • Sequencer: NovaSeq
  • Input mass: 0.6 ng
  • Number of reads: 220 M
  • Genome size (estimated): 458 Mb
  • Raw coverage: 72.1 x
  • Inferred molecule length: 20 Kb
  • N50 Contig Length: 32.8 Kb
  • N50 Phase Block: 168 Kb
  • N50 Scaffold Length: 64 Kb
  • Analysis run with --maxreads=220000000

This dataset is licensed under the Creative Commons Attribution license.