9k Brain Cells from an E18 Mouse

Universal 3' Gene Expression dataset analyzed using Cell Ranger 2.0.1

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Dataset overview

Output and supplemental files

Input files

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Cells from cortex, hippocampus and subventricular zone of an E18 mouse.

9,128 cells detected
Sequenced on Illumina Hiseq4000 with approximately 42,000 reads per cell
26bp read1 (16bp Chromium barcode and 10bp UMI), 98bp read2 (transcript), and 8bp I7 sample barcode
Analysis run with --cells=10000

This dataset is licensed under the Creative Commons Attribution license.